Mouse brain p(22) alignment

• Single-Omics alignment of mouse brain of H3K27ac+RNA with ATAC+RNAmouse brain
  • Loading package
  • Loading and Pre-processing two slices
  • Constructing neighbor graph and training the Pointnet++Encoder
  • Training the optimal transport module
  • Target align slice truth
  • source align slice truth
  • Visualize and quantify the evaluation of seven region alignment results
• Alignment tutorial for Multimodal alignment
  • Loading package
  • We use multimodal clustering results as annotation information for aligned slices
  • Loading data
  • Pre-processing data
  • Constructing the ATAC+RNA neighbor graph1 and training the PointNet++ Encoder
  • Constructing the H3K27ac+RNA neighbor graph2 and training the PointNet++ Encoder
  • Pretrained encoder and graph structure loading into multimodal alignment module
  • Annotation information of alignment slices and visualization of multimodal alignment results